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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900374.1_cds_XP_016450440.1_44893
CDS Infomation

[gene=LOC107775238] [db_xref=GeneID:107775238] [protein=E3 ubiquitin-protein ligase RING1-like] [protein_id=XP_016450440.1] [location=complement(join(72306..72340,76367..77348))] [gbkey=CDS]
Sequence

ATGTCCTCAACAGAAAACCCTAATAATGGGATCAGGAACTTCCGGCGTTACTGGTGTTAT
CAATGCCATCGCACTGTCATAATATCGCCCGAAAACCCTTCGGAGATCGTTTGTCCTCGA
TGTTTCGGCCACTTCCTTTGCGAAATCGAAGAAACAAACGCTAGACAAATCTTGGACTTC
ACTGCATTTGATCCTTCCCCAGAAGCTAGAATTCTTGAAGCTCTAACTCTCATGCTTGAT
CCTAATTTGTTCAACAGATCTAGCAGTGGCAATGCAGTTCCCATTTTTCGACGATCGGAC
GGGACAGAAACCATAGTACCATCTGATTCTATCAGGCCTACACGTGAACAACGCAGAACA
CGAGACTCCTGGCTAAGGCCAAGAAGACGATACTCATTTCTAAGTAATGACACGGATGAA
TGGACACCGGAGAGTGGAATTCTAGCACGTCCACGTTCATGGATTATTCTTCGGCCAGCC
GGAGAATATTCTTCCGGTGGACCTAACCGACTAGGAGAAAGGCGGTTAGGTCCACCTTCA
GGAGTGAACGATAGAGATTACTTTACAGGTCCAGGCCTTGAAAACCTAATAGAAGAGTTA
ACTGAAAATGATCGGCCAGGTCCAGCACCGGCACCAGAGCCAATCATAAATTCTATTCCG
ACGGTGGTGATTACGCCAGAACACTTAAGGGATGATTCAGAATGTCCTGTTTGTAAGGAA
AAGTTCAAAATAGGCGGAGAAGCAAGAGAGTTGCCATGCAAACATATATACCATTCCGAT
TGCATTGTGCCTTGGTTAAGGCTTCATAATTCTTGCCCGGTTTGTCGAAATCCGTTGCCG
GTTTCTTCTGAAATTCAAATGGATACTTCGGATGATTGTCTTGAAGAAGGGATCAATAGA
CAGCGGCGTTGCTTCAGACTTAGACAAATTGCAGCTTCTCTTTGGCCATTTCGTTCGAGG
TATCGCCCTTTGCGTAACCATGATGAACCGTCGGGGCCTTCATGTCATATTCTTTAG

Peptide Sequence

PEP ID

XP_016450440.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nicotiana tabacum]
Sequence

MSSTENPNNGIRNFRRYWCYQCHRTVIISPENPSEIVCPRCFGHFLCEIEETNARQILDF
TAFDPSPEARILEALTLMLDPNLFNRSSSGNAVPIFRRSDGTETIVPSDSIRPTREQRRT
RDSWLRPRRRYSFLSNDTDEWTPESGILARPRSWIILRPAGEYSSGGPNRLGERRLGPPS
GVNDRDYFTGPGLENLIEELTENDRPGPAPAPEPIINSIPTVVITPEHLRDDSECPVCKE
KFKIGGEARELPCKHIYHSDCIVPWLRLHNSCPVCRNPLPVSSEIQMDTSDDCLEEGINR
QRRCFRLRQIAASLWPFRSRYRPLRNHDEPSGPSCHIL

Transcript Sequence

Gene sequence data has not been registered.